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dna methylation
•
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0
votes
1
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1.2k
views
Estimate cell proportion from beta values using minfi estimateCellCounts?
minfi
cell proportion
estimateCellCounts
DNA Methylation
5.1 years ago
grayapply2009
• 0
1
vote
2
replies
2.7k
views
WGCNA on methylation data
normalization
DNA methylation
WGCNA
updated 5.8 years ago by
Peter Langfelder
★ 3.0k • written 5.8 years ago by
enora.fremy
• 0
1
vote
2
replies
1.2k
views
Comparing more than 2 experimental groups with MEDIPS?
medips
medip-seq
dna methylation
dmr analysis
updated 6.4 years ago by
Lukas Chavez
▴ 570 • written 6.4 years ago by
mtefit
• 0
7
votes
7
replies
2.0k
views
Using GenomicDataCommons R package to identify cases with both DNA methylation and gene expression data
R
gdc
rna-seq
dna methylation
updated 6.5 years ago by
Sean Davis
21k • written 6.5 years ago by
RichardJActon
▴ 50
1
vote
2
replies
1.6k
views
Odd Sample after SWAN normalisation, DNA methylation analysis EPIC array
minfi
normalization
outliers
dna methylation
densityplot
6.7 years ago
peter.fransquet
• 0
0
votes
0
replies
933
views
iEVORA wrapping up error
differential variability
dna methylation
iEVORA
DVP
7.0 years ago
poojitha.stemcell
▴ 10
0
votes
0
replies
1.2k
views
differential methylation analysis with RnBeads
rnbeads
methylation
methylationepic
dna methylation
7.2 years ago
gabrielrfries
• 0
0
votes
1
reply
1.3k
views
Problem in working with BiSeq - BSraw
dna methylation
biseq
updated 7.3 years ago by
Gordon Smyth
52k • written 7.3 years ago by
ahmad.moousavi
• 0
2
votes
5
replies
2.2k
views
Error when prepare the TCGAdata
tcgabiolinks
dna methylation
updated 7.4 years ago by
Marcel Ramos
700 • written 7.4 years ago by
michaelwxf2012
• 0
1
vote
1
reply
2.2k
views
Beta Value Analysis - DNA Methylation Dataset
dna methylation
illimina 450k methylation
beta
M
significance
updated 7.6 years ago by
James W. MacDonald
68k • written 7.6 years ago by
skids121
• 0
0
votes
0
replies
1.5k
views
DNA methylation 450k data - minfi - preprocessFunnorm - CNV cases vs non-CNV controls
CNV
minfi
preprocessing
dna methylation
8.1 years ago
Thomas
• 0
1
vote
2
replies
1.2k
views
Correlating DNA methylation and Illumina gene expression microarray data
microarray
HM450
dna methylation
cohcap
updated 8.2 years ago by
James W. MacDonald
68k • written 8.2 years ago by
poojitha.stemcell
▴ 10
0
votes
1
reply
1.4k
views
error when using bumphunter package with illumina 450k data
minfi
bumphunter
DNA methylation
illumina450k
updated 8.8 years ago by
James W. MacDonald
68k • written 8.8 years ago by
fleur_p90
• 0
13 results • Page
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Additionally, i checked my bigwig in igv, it shows that the ctrl_1 is more like ko_1, and ctrl_2's track is more like ko_2's track. Did an…
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by
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4.1k
There is a Bioconductor release today. There were notifications on the bioc-devel mailing list https://stat.ethz.ch/pipermail/bioc-devel…
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Bioconductor 3.21 is Released!
Comment: GSVA ssGSEA vs. Broad implementation of ssGSEA
Comment: GSVA ssGSEA vs. Broad implementation of ssGSEA
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